Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
NcanP55066 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NcanP55066 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
NcanP55066 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC7.75□□□□□ -1.17
NcanP55066 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NcanP55066 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.75□□□□□ -1.17
NcanP55066 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
NcanP55066 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC7.75□□□□□ -1.17
NcanP55066 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
NcanP55066 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
NcanP55066 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
NcanP55066 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
NcanP55066 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.75□□□□□ -1.17
NcanP55066 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.75□□□□□ -1.17
NcanP55066 Gm37139-201ENSMUST00000192134 4419 ntBASIC7.75□□□□□ -1.17
NcanP55066 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
NcanP55066 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC7.74□□□□□ -1.17
NcanP55066 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Gm45767-201ENSMUST00000212778 4561 ntBASIC7.74□□□□□ -1.17
NcanP55066 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
NcanP55066 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NcanP55066 Gm25919-201ENSMUST00000104271 132 ntBASIC7.74□□□□□ -1.17
NcanP55066 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
NcanP55066 Gm15120-201ENSMUST00000120602 301 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm11257-201ENSMUST00000121313 315 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm25969-201ENSMUST00000157166 132 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm9286-201ENSMUST00000173586 508 ntBASIC7.74□□□□□ -1.17
NcanP55066 Mir3062-201ENSMUST00000174986 105 ntBASIC7.74□□□□□ -1.17
NcanP55066 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm43215-201ENSMUST00000199108 252 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm31166-201ENSMUST00000209326 288 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm2221-201ENSMUST00000209342 418 ntBASIC7.74□□□□□ -1.17
NcanP55066 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.74□□□□□ -1.17
NcanP55066 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm3785-201ENSMUST00000221000 202 ntBASIC7.74□□□□□ -1.17
NcanP55066 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.74□□□□□ -1.17
NcanP55066 Gm4012-201ENSMUST00000221504 581 ntBASIC7.74□□□□□ -1.17
NcanP55066 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NcanP55066 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NcanP55066 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
NcanP55066 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
NcanP55066 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
NcanP55066 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.74□□□□□ -1.17
NcanP55066 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC7.74□□□□□ -1.17
NcanP55066 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NcanP55066 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Gm43196-201ENSMUST00000201762 2114 ntBASIC7.73□□□□□ -1.17
NcanP55066 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
NcanP55066 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
NcanP55066 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
NcanP55066 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NcanP55066 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NcanP55066 Gm15310-201ENSMUST00000117891 372 ntBASIC7.73□□□□□ -1.17
NcanP55066 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.73□□□□□ -1.17
NcanP55066 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Gm23030-201ENSMUST00000158004 273 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm17212-201ENSMUST00000166666 259 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm20396-201ENSMUST00000173358 745 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Gm27034-201ENSMUST00000182552 940 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.73□□□□□ -1.17
NcanP55066 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm29813-201ENSMUST00000195856 447 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm9504-201ENSMUST00000196322 468 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm43560-201ENSMUST00000198100 773 ntBASIC7.73□□□□□ -1.17
NcanP55066 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.73□□□□□ -1.17
NcanP55066 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms