Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm12804-201ENSMUST00000121030 999 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm16298-201ENSMUST00000161107 420 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm44342-201ENSMUST00000196874 129 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Gm44383-201ENSMUST00000198940 129 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Gm44411-201ENSMUST00000204172 349 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC8.11□□□□□ -1.11
Col2a1P28481 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col2a1P28481 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.11□□□□□ -1.11
Col2a1P28481 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col2a1P28481 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Col2a1P28481 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col2a1P28481 Gm11553-201ENSMUST00000120682 240 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 Gm12754-201ENSMUST00000121908 454 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Gm8550-201ENSMUST00000161621 653 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 Gm29464-201ENSMUST00000187692 513 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.1□□□□□ -1.11
Col2a1P28481 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Col2a1P28481 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col2a1P28481 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.1□□□□□ -1.11
Col2a1P28481 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm14489-201ENSMUST00000120868 901 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Gm15349-201ENSMUST00000121154 204 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm21614-201ENSMUST00000183260 1005 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Mir6244-201ENSMUST00000184156 117 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm17895-201ENSMUST00000194028 874 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.09□□□□□ -1.11
Col2a1P28481 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.09□□□□□ -1.11
Col2a1P28481 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC8.09□□□□□ -1.11
Col2a1P28481 AC154618.2-201ENSMUST00000228299 452 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm37465-201ENSMUST00000192845 3290 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col2a1P28481 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col2a1P28481 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.09□□□□□ -1.11
Col2a1P28481 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Col2a1P28481 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Col2a1P28481 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC8.09□□□□□ -1.12
Col2a1P28481 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Col2a1P28481 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Col2a1P28481 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Col2a1P28481 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Col2a1P28481 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Col2a1P28481 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.08□□□□□ -1.12
Col2a1P28481 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col2a1P28481 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col2a1P28481 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms