Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.4□□□□□ -1.07
Pde6aP27664 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Pde6aP27664 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Pde6aP27664 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Pde6aP27664 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm14202-201ENSMUST00000120121 311 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm13940-201ENSMUST00000121023 301 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm15538-201ENSMUST00000121410 313 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm14251-201ENSMUST00000122133 279 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm22730-201ENSMUST00000158085 171 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm4613-201ENSMUST00000165488 276 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Pde6aP27664 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Pde6aP27664 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Pde6aP27664 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Pde6aP27664 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm27684-201ENSMUST00000183778 80 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm18660-201ENSMUST00000199542 629 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm19056-201ENSMUST00000218220 797 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Pde6aP27664 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.39□□□□□ -1.07
Pde6aP27664 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Pde6aP27664 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.38□□□□□ -1.07
Pde6aP27664 Gm14938-201ENSMUST00000119482 943 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm6027-201ENSMUST00000121467 756 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm12321-201ENSMUST00000121485 804 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 Gm25178-201ENSMUST00000122633 325 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC8.38□□□□□ -1.07
Pde6aP27664 Gm25505-201ENSMUST00000157220 246 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm26323-201ENSMUST00000157743 175 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Pea15b-201ENSMUST00000182806 387 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Mir8114-201ENSMUST00000183582 111 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm38022-201ENSMUST00000191762 403 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm37631-201ENSMUST00000192275 364 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm43656-201ENSMUST00000197882 434 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm43212-201ENSMUST00000198208 394 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm5305-201ENSMUST00000204010 746 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm8921-201ENSMUST00000204306 649 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 AC132433.1-201ENSMUST00000221553 1101 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms