Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.37□□□□□ -1.39
P20040 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
P20040 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
P20040 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
P20040 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.36□□□□□ -1.39
P20040 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.36□□□□□ -1.39
P20040 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.36□□□□□ -1.39
P20040 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.36□□□□□ -1.39
P20040 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.36□□□□□ -1.39
P20040 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.36□□□□□ -1.39
P20040 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
P20040 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Gm8624-201ENSMUST00000118083 432 ntBASIC6.36□□□□□ -1.39
P20040 Gm14480-201ENSMUST00000118521 433 ntBASIC6.36□□□□□ -1.39
P20040 Gm11188-201ENSMUST00000122382 388 ntBASIC6.36□□□□□ -1.39
P20040 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.36□□□□□ -1.39
P20040 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.36□□□□□ -1.39
P20040 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.36□□□□□ -1.39
P20040 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.36□□□□□ -1.39
P20040 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
P20040 Gm29008-201ENSMUST00000189387 298 ntBASIC6.36□□□□□ -1.39
P20040 Gm20690-202ENSMUST00000195126 355 ntBASIC6.36□□□□□ -1.39
P20040 Gm37724-201ENSMUST00000195240 1221 ntBASIC6.36□□□□□ -1.39
P20040 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Gm44356-201ENSMUST00000196731 111 ntBASIC6.36□□□□□ -1.39
P20040 Gm43040-201ENSMUST00000202399 558 ntBASIC6.36□□□□□ -1.39
P20040 Gm5314-201ENSMUST00000204852 466 ntBASIC6.36□□□□□ -1.39
P20040 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.36□□□□□ -1.39
P20040 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.36□□□□□ -1.39
P20040 Gm45506-201ENSMUST00000211620 280 ntBASIC6.36□□□□□ -1.39
P20040 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.36□□□□□ -1.39
P20040 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.36□□□□□ -1.39
P20040 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC6.36□□□□□ -1.39
P20040 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.36□□□□□ -1.39
P20040 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.36□□□□□ -1.39
P20040 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.36□□□□□ -1.39
P20040 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.36□□□□□ -1.39
P20040 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
P20040 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.36□□□□□ -1.39
P20040 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
P20040 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
P20040 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
P20040 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
P20040 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
P20040 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
P20040 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.36□□□□□ -1.39
P20040 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.35□□□□□ -1.39
P20040 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.35□□□□□ -1.39
P20040 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
P20040 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.35□□□□□ -1.39
P20040 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
P20040 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC6.35□□□□□ -1.39
P20040 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.35□□□□□ -1.39
P20040 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
P20040 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
P20040 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
P20040 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
P20040 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.35□□□□□ -1.39
P20040 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.35□□□□□ -1.39
P20040 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
P20040 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Gm11810-201ENSMUST00000118311 333 ntBASIC6.35□□□□□ -1.39
P20040 Gm5759-201ENSMUST00000119203 811 ntBASIC6.35□□□□□ -1.39
P20040 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.35□□□□□ -1.39
P20040 Gm12593-201ENSMUST00000120981 743 ntBASIC6.35□□□□□ -1.39
P20040 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
P20040 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.35□□□□□ -1.39
P20040 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.35□□□□□ -1.39
P20040 Gm22206-201ENSMUST00000158612 116 ntBASIC6.35□□□□□ -1.39
P20040 Gm7502-201ENSMUST00000169235 733 ntBASIC6.35□□□□□ -1.39
P20040 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.35□□□□□ -1.39
P20040 Mir199b-201ENSMUST00000175066 110 ntBASIC6.35□□□□□ -1.39
P20040 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms