Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm8877-201ENSMUST00000172657 655 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm22690-201ENSMUST00000175054 110 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm9476-201ENSMUST00000179109 696 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Mir6341-201ENSMUST00000183490 121 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Btg1-ps1-202ENSMUST00000184432 825 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Scgb1b12-201ENSMUST00000188355 417 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm3142-201ENSMUST00000190107 414 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm42581-201ENSMUST00000201774 966 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm44472-201ENSMUST00000204922 943 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm42402-201ENSMUST00000208341 1054 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm39164-202ENSMUST00000211519 236 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC6.75□□□□□ -1.33
Hoxd3P09027 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm35619-201ENSMUST00000222548 600 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.75□□□□□ -1.33
Hoxd3P09027 CT009509.1-201ENSMUST00000223855 466 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 AV026068-218ENSMUST00000223980 575 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 AC140462.1-201ENSMUST00000225776 853 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Olfr444-201ENSMUST00000095955 1050 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm37304-201ENSMUST00000193833 2886 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm10644-201ENSMUST00000098595 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Hmgcs1-201ENSMUST00000179869 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Hbp1-202ENSMUST00000172314 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm12608-201ENSMUST00000122013 1715 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
Hoxd3P09027 AC122829.1-201ENSMUST00000219743 1631 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Ppil4-201ENSMUST00000015901 3471 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Serpina3j-201ENSMUST00000109957 2155 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hoxd3P09027 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm37843-201ENSMUST00000195213 2639 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Nlrp14-202ENSMUST00000142623 1437 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Gm5997-201ENSMUST00000208154 1864 ntBASIC6.75□□□□□ -1.33
Hoxd3P09027 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Hoxd3P09027 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Zfp62-203ENSMUST00000109198 3872 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hoxd3P09027 Ctf2-201ENSMUST00000076091 1754 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Prss35-202ENSMUST00000179574 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Slc25a30-201ENSMUST00000022580 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Nnt-202ENSMUST00000099149 3464 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Ube2k-205ENSMUST00000201383 1553 ntTSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm43311-201ENSMUST00000200016 2377 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Ttc5-202ENSMUST00000226768 2366 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Morf4l2-214ENSMUST00000166930 1926 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Asic2-202ENSMUST00000066197 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Hacl1-201ENSMUST00000022437 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 AC123665.5-201ENSMUST00000226648 1392 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 2310040G07Rik-201ENSMUST00000101090 478 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm25803-201ENSMUST00000104419 131 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm15021-201ENSMUST00000117832 742 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm15971-201ENSMUST00000119372 211 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm14283-201ENSMUST00000119763 325 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm6285-201ENSMUST00000122012 498 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms