Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm6807-201ENSMUST00000077435 888 ntBASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Gm3550W4VSN7 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm22152-201ENSMUST00000116966 125 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm7831-201ENSMUST00000117990 552 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm11850-201ENSMUST00000119679 479 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm12518-201ENSMUST00000122075 779 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm17973-201ENSMUST00000174509 520 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Mir1231-201ENSMUST00000175639 81 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Trbv9-201ENSMUST00000194494 290 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm42965-201ENSMUST00000201254 250 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm31579-201ENSMUST00000203306 966 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm5154-201ENSMUST00000203971 399 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm45478-201ENSMUST00000209472 211 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3550W4VSN7 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.06□□□□□ -1.44
Gm3550W4VSN7 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.05□□□□□ -1.44
Gm3550W4VSN7 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.05□□□□□ -1.44
Gm3550W4VSN7 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Gm3550W4VSN7 Gm25725-201ENSMUST00000104528 130 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 120.9 ms