Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm15369-201ENSMUST00000119681 394 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm16200-201ENSMUST00000120385 331 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm13131-201ENSMUST00000122228 321 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm20694-201ENSMUST00000176943 404 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm19560-201ENSMUST00000177510 514 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm27150-201ENSMUST00000183441 1038 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm27228-201ENSMUST00000184500 1038 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm29073-201ENSMUST00000185563 664 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm29165-201ENSMUST00000190655 664 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm29211-201ENSMUST00000191470 664 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm38213-201ENSMUST00000193203 173 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm43560-201ENSMUST00000198100 773 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm42538-202ENSMUST00000199431 358 ntTSL 3 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm42760-201ENSMUST00000199814 311 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm44721-201ENSMUST00000206978 472 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 AC153957.1-201ENSMUST00000215235 229 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 AC156832.3-201ENSMUST00000215591 435 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 AC134537.1-201ENSMUST00000219205 265 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 AC153798.1-201ENSMUST00000219942 244 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 AC116395.1-201ENSMUST00000225480 1143 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Tonsl-201ENSMUST00000078803 885 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Rap1gds1-209ENSMUST00000200396 2622 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim42Q9D2H5 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 4930488N15Rik-201ENSMUST00000212830 1561 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Klrb1b-202ENSMUST00000172887 1416 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 n-R5s2-201ENSMUST00000101968 119 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm25092-201ENSMUST00000103996 129 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 n-R5s194-201ENSMUST00000104719 119 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm12751-201ENSMUST00000122336 381 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm23555-201ENSMUST00000157815 135 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Ear6-202ENSMUST00000169070 893 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 n-R5s112-201ENSMUST00000178208 119 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 n-R5s125-201ENSMUST00000179377 119 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 n-R5s120-201ENSMUST00000180000 119 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Mir8100-201ENSMUST00000184230 121 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm27406-201ENSMUST00000184881 182 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm18357-201ENSMUST00000188184 580 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm29372-201ENSMUST00000191416 364 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm43382-201ENSMUST00000198954 838 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm43578-201ENSMUST00000201250 459 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm7836-201ENSMUST00000209730 432 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 Gm18914-201ENSMUST00000214625 616 ntBASIC7.98□□□□□ -1.13
Trim42Q9D2H5 D330037F02Rik-202ENSMUST00000217400 1247 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim42Q9D2H5 AC151982.1-201ENSMUST00000223546 464 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms