Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm12365-201ENSMUST00000117931 568 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm16056-201ENSMUST00000119293 135 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm12632-201ENSMUST00000121223 495 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm23007-201ENSMUST00000158951 177 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm4246-201ENSMUST00000172822 216 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm22408-201ENSMUST00000174925 65 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Mir199b-201ENSMUST00000175066 110 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm25692-201ENSMUST00000175444 125 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm5445-201ENSMUST00000180224 480 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm26729-201ENSMUST00000180744 352 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm9149-201ENSMUST00000182724 1007 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm9240-201ENSMUST00000206527 742 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm5564-201ENSMUST00000034916 967 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Olfr890-201ENSMUST00000079804 945 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Mir135b-201ENSMUST00000083501 97 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm45251-201ENSMUST00000209486 1465 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ska1Q9CPV1 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm5255-201ENSMUST00000120125 642 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm11945-201ENSMUST00000120551 476 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm11258-201ENSMUST00000121086 1218 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm1947-201ENSMUST00000122451 910 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Mir1962-201ENSMUST00000157516 121 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm21182-201ENSMUST00000178899 794 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Mir6919-201ENSMUST00000185146 62 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm8304-201ENSMUST00000185744 584 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm43542-201ENSMUST00000199505 379 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm43725-201ENSMUST00000200122 369 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm16391-201ENSMUST00000086601 447 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Cmah-208ENSMUST00000224819 9482 ntBASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Ska1Q9CPV1 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms