Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7□□□□□ -1.29
Cdh23Q99PF4 AC157822.1-201ENSMUST00000196643 80 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm18943-201ENSMUST00000207357 1216 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm9535-201ENSMUST00000218499 768 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC7□□□□□ -1.29
Cdh23Q99PF4 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7□□□□□ -1.29
Cdh23Q99PF4 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cdh23Q99PF4 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm3943-201ENSMUST00000118606 718 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Calr-ps-201ENSMUST00000121776 485 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Mir6403-201ENSMUST00000185007 129 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm5654-201ENSMUST00000217787 475 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Snora21-201ENSMUST00000082967 137 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm45532-201ENSMUST00000210342 3620 ntBASIC7□□□□□ -1.29
Cdh23Q99PF4 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Cdh23Q99PF4 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
Cdh23Q99PF4 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm15209-201ENSMUST00000117703 400 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm13641-201ENSMUST00000117993 473 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm12262-201ENSMUST00000119915 305 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm26729-201ENSMUST00000180744 352 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm29470-201ENSMUST00000188007 696 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm38131-201ENSMUST00000192449 430 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm7825-201ENSMUST00000204046 416 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm24695-201ENSMUST00000083877 83 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm8728-201ENSMUST00000207367 2178 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm8486-201ENSMUST00000207508 2171 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm8685-201ENSMUST00000207567 2183 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm16443-201ENSMUST00000207909 2184 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm14512-201ENSMUST00000117924 230 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm9597-201ENSMUST00000171913 602 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm18447-201ENSMUST00000187501 307 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm46203-201ENSMUST00000218130 478 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm17849-201ENSMUST00000219788 853 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cdh23Q99PF4 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms