Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cchcr1Q8K2I2 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cchcr1Q8K2I2 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.44□□□□□ -1.06
Cchcr1Q8K2I2 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cchcr1Q8K2I2 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cchcr1Q8K2I2 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Malat1-201ENSMUST00000172812 6983 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm24893-201ENSMUST00000122745 369 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Mir8094-201ENSMUST00000183361 117 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Txn-ps1-201ENSMUST00000186385 309 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm29354-201ENSMUST00000187613 696 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm9315-201ENSMUST00000222696 908 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cchcr1Q8K2I2 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm14248-201ENSMUST00000117790 544 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm14480-201ENSMUST00000118521 433 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm25770-201ENSMUST00000158566 115 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm23164-201ENSMUST00000175084 111 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm29357-201ENSMUST00000186877 698 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm43013-201ENSMUST00000198216 247 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 AV026068-219ENSMUST00000224148 933 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Olfr683-201ENSMUST00000061284 960 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Mir484-201ENSMUST00000093566 67 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cchcr1Q8K2I2 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm13525-201ENSMUST00000120607 478 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm22206-201ENSMUST00000158612 116 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm5181-201ENSMUST00000183140 971 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm36935-201ENSMUST00000192526 292 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm5119-201ENSMUST00000215858 634 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Gm36758-201ENSMUST00000222594 310 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 AV026068-229ENSMUST00000225516 595 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 AC139569.1-201ENSMUST00000226080 614 ntBASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Cchcr1Q8K2I2 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms