Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm14631-201ENSMUST00000119067 594 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm11928-201ENSMUST00000119323 437 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm5255-201ENSMUST00000120125 642 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm11726-201ENSMUST00000121028 424 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm43212-201ENSMUST00000198208 394 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm19764-201ENSMUST00000203630 649 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm2398-201ENSMUST00000218347 883 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.47□□□□□ -1.05
Nup88Q8CEC0 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.46□□□□□ -1.05
Nup88Q8CEC0 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Nup88Q8CEC0 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Nup88Q8CEC0 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Nup88Q8CEC0 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.46□□□□□ -1.05
Nup88Q8CEC0 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm22438-201ENSMUST00000104049 132 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm14279-201ENSMUST00000117142 332 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm10243-201ENSMUST00000117571 333 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm12710-201ENSMUST00000119011 216 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm13735-201ENSMUST00000120217 670 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm6428-201ENSMUST00000161062 345 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm21839-201ENSMUST00000179536 378 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Pea15b-201ENSMUST00000182806 387 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm44356-201ENSMUST00000196731 111 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm45509-201ENSMUST00000209624 1229 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm18860-201ENSMUST00000212029 764 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm6887-201ENSMUST00000080945 482 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm10247-201ENSMUST00000090395 333 ntBASIC8.46□□□□□ -1.06
Nup88Q8CEC0 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Nup88Q8CEC0 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms