Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 AC159188.2-201ENSMUST00000224103 1301 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 AC124746.1-201ENSMUST00000227535 1300 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm23529-201ENSMUST00000104562 132 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm7785-201ENSMUST00000117121 892 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm11845-201ENSMUST00000117886 327 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm14989-201ENSMUST00000120497 207 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm11904-201ENSMUST00000120562 248 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Mup-ps13-201ENSMUST00000120662 545 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm6292-201ENSMUST00000120712 1095 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm13720-201ENSMUST00000120741 196 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm13726-201ENSMUST00000121278 794 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm21990-201ENSMUST00000124692 383 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm25713-201ENSMUST00000158625 109 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Zfp950-206ENSMUST00000178819 171 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm44277-201ENSMUST00000205128 649 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm44654-201ENSMUST00000208052 329 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm45247-201ENSMUST00000210757 309 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 AC122901.2-201ENSMUST00000216926 285 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm18619-201ENSMUST00000222722 1147 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm24143-201ENSMUST00000082633 145 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Mir146b-201ENSMUST00000093619 109 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Smcr8-202ENSMUST00000102667 3544 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm12834-201ENSMUST00000121855 2829 ntBASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trim47Q8C0E3 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm37074-201ENSMUST00000193444 1843 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm24334-201ENSMUST00000104210 128 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm42606-201ENSMUST00000114209 239 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm10651-201ENSMUST00000118212 609 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm14982-201ENSMUST00000121102 442 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm9064-201ENSMUST00000163579 566 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm18354-201ENSMUST00000173515 1068 ntBASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms