Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm8991-201ENSMUST00000073014 1075 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Mad2l1-201ENSMUST00000101343 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm43795-201ENSMUST00000202051 2366 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Cdkl5-201ENSMUST00000087104 3269 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim35Q8C006 Aar2-201ENSMUST00000029158 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm43737-201ENSMUST00000199915 2740 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.89□□□□□ -0.83
Trim35Q8C006 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim35Q8C006 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trim35Q8C006 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Arhgap25-203ENSMUST00000113637 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Odf2-210ENSMUST00000113765 3188 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm26965-201ENSMUST00000167914 1520 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Ick-204ENSMUST00000118869 2540 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Rcbtb2-209ENSMUST00000164822 3531 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm43523-201ENSMUST00000197397 2878 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm43362-201ENSMUST00000198192 2470 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm43031-201ENSMUST00000198500 1887 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm14853-201ENSMUST00000116081 549 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm13808-201ENSMUST00000121353 184 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm12035-201ENSMUST00000121890 623 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm6939-201ENSMUST00000122029 864 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm14699-201ENSMUST00000122340 228 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm24352-201ENSMUST00000158966 125 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm7420-201ENSMUST00000162836 842 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm8226-201ENSMUST00000190511 798 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Ighv3-7-201ENSMUST00000193370 348 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm8704-201ENSMUST00000197181 435 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm3922-201ENSMUST00000200519 435 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm7812-201ENSMUST00000203479 874 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm18256-201ENSMUST00000209087 907 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm19599-201ENSMUST00000218898 358 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm18873-201ENSMUST00000219517 1045 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm7540-201ENSMUST00000219764 926 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm18631-201ENSMUST00000223125 1043 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 AC154477.1-201ENSMUST00000226515 773 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 AC103672.1-201ENSMUST00000227502 365 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 AC137842.2-201ENSMUST00000227734 797 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm9701-201ENSMUST00000077976 427 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm23627-201ENSMUST00000082459 107 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm22502-201ENSMUST00000082488 107 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm24149-201ENSMUST00000082757 107 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Mir421-201ENSMUST00000083575 76 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm37674-201ENSMUST00000194177 1834 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 AC117656.3-203ENSMUST00000225007 1809 ntBASIC9.88□□□□□ -0.83
Trim35Q8C006 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm1559-201ENSMUST00000219596 3117 ntTSL 3 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms