Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm18690-201ENSMUST00000204488 985 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm44508-201ENSMUST00000206943 1157 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm45432-201ENSMUST00000210391 416 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm7151-201ENSMUST00000211511 954 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 AC158531.2-201ENSMUST00000224264 473 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.59□□□□□ -1.19
Ccdc40Q8BI79 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.59□□□□□ -1.2
Ccdc40Q8BI79 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ccdc40Q8BI79 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm13521-201ENSMUST00000118922 866 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm22262-201ENSMUST00000158713 86 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm24738-201ENSMUST00000158856 123 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm5611-201ENSMUST00000164523 852 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Mir6403-201ENSMUST00000185007 129 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm17965-201ENSMUST00000193904 517 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm17950-201ENSMUST00000214617 646 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm8058-201ENSMUST00000217247 587 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm19154-201ENSMUST00000223330 940 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 AC131586.4-201ENSMUST00000228424 668 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm7493-201ENSMUST00000085919 626 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ccdc40Q8BI79 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Mir763-201ENSMUST00000103249 120 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Mir669e-201ENSMUST00000117003 119 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ccdc40Q8BI79 Gm28546-201ENSMUST00000188221 615 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms