Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm14747-201ENSMUST00000149888 984 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm5456-201ENSMUST00000170706 844 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm17045-201ENSMUST00000178600 844 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm44342-201ENSMUST00000196874 129 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm44383-201ENSMUST00000198940 129 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm20223-201ENSMUST00000199932 805 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm45739-201ENSMUST00000213094 388 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Nup98Q6PFD9 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Nup98Q6PFD9 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm15789-201ENSMUST00000118992 1359 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm14865-201ENSMUST00000117523 494 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm13357-201ENSMUST00000120528 537 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm12804-201ENSMUST00000121030 999 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm27152-201ENSMUST00000183828 99 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm27295-201ENSMUST00000184264 153 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 AC099760.1-201ENSMUST00000196300 153 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm43772-201ENSMUST00000202052 379 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm18012-201ENSMUST00000204558 773 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm44896-201ENSMUST00000206190 772 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 AC116596.2-203ENSMUST00000227345 731 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 CT009757.4-201ENSMUST00000221520 2541 ntBASIC8.35□□□□□ -1.07
Nup98Q6PFD9 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Nup98Q6PFD9 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm26144-201ENSMUST00000104475 132 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm27972-201ENSMUST00000184720 137 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm38840-201ENSMUST00000204716 843 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm7413-201ENSMUST00000219498 462 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Zfp865-202ENSMUST00000076791 1129 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Nup98Q6PFD9 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms