Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Gm5001-201ENSMUST00000204361 331 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 Chn2-215ENSMUST00000204921 861 ntTSL 5 BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Pafah1b2-203ENSMUST00000214179 794 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Gm4263-202ENSMUST00000221392 667 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC9.93□□□□□ -0.82
Mkrn3Q60764 CR974485.1-201ENSMUST00000222408 402 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 AC113178.1-201ENSMUST00000227616 935 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 Hspb3-201ENSMUST00000054650 781 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Gm23815-201ENSMUST00000083231 107 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 Gm23520-201ENSMUST00000093736 107 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 Tmem87a-202ENSMUST00000090046 2897 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Gm42899-201ENSMUST00000197034 2667 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 BB014433-201ENSMUST00000050493 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Gm43990-201ENSMUST00000203790 1691 ntBASIC9.93□□□□□ -0.82
Mkrn3Q60764 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Mkrn3Q60764 Crxos-202ENSMUST00000125993 2246 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 BC025920-203ENSMUST00000119753 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm45149-201ENSMUST00000206459 2172 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Tars-201ENSMUST00000022849 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Prim1-205ENSMUST00000178041 1536 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Tom1l1-203ENSMUST00000107868 2093 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 CT572991.1-201ENSMUST00000222755 1423 ntTSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Prokr1-201ENSMUST00000050887 4075 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Fam227b-201ENSMUST00000110446 1858 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm9436-201ENSMUST00000120949 1855 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm4451-201ENSMUST00000186000 1891 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Map4k4-218ENSMUST00000195860 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Ighv3-8-201ENSMUST00000103483 394 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm16400-201ENSMUST00000116523 1029 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm14106-201ENSMUST00000119382 438 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm13005-201ENSMUST00000119518 585 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm9516-201ENSMUST00000119684 424 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm15465-201ENSMUST00000120368 358 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm13593-201ENSMUST00000121329 692 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm27588-201ENSMUST00000185096 263 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm28596-201ENSMUST00000185870 696 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm28446-201ENSMUST00000186508 694 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm28588-201ENSMUST00000191581 796 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm37828-201ENSMUST00000192496 432 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm32295-201ENSMUST00000192558 696 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm31260-201ENSMUST00000193478 696 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 AC120540.1-201ENSMUST00000221879 324 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 AC158511.1-201ENSMUST00000223622 764 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 AC154257.2-201ENSMUST00000224166 340 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 AC170810.3-201ENSMUST00000226177 374 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 AC166344.2-201ENSMUST00000226747 374 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Lkaaear1-201ENSMUST00000052416 718 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Vmn1r200-201ENSMUST00000074324 1063 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Gm44883-201ENSMUST00000206063 3258 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 C79130-201ENSMUST00000199610 4296 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Rbm25-201ENSMUST00000048155 4226 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Muc20-202ENSMUST00000115116 3673 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Mkrn3Q60764 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mkrn3Q60764 AC154806.2-201ENSMUST00000227212 2385 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC9.92□□□□□ -0.82
Mkrn3Q60764 Atp7b-202ENSMUST00000110738 4044 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Mkrn3Q60764 Rims1-207ENSMUST00000164877 2294 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Mkrn3Q60764 Gm6524-201ENSMUST00000209673 1443 ntBASIC9.91□□□□□ -0.82
Mkrn3Q60764 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Mkrn3Q60764 Armcx2-207ENSMUST00000168264 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Mkrn3Q60764 Tcaf2-201ENSMUST00000031879 4497 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Mkrn3Q60764 Nme7-207ENSMUST00000193683 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Mkrn3Q60764 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms