Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Mgam2-ps-203ENSMUST00000216691 1709 ntTSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Gm16409-201ENSMUST00000100510 747 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.19□□□□□ -1.26
SgcbP82349 Gm13750-201ENSMUST00000117621 465 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm9143-201ENSMUST00000120745 745 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm8172-201ENSMUST00000120762 750 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm12455-201ENSMUST00000121242 416 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm14156-201ENSMUST00000121538 483 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC7.19□□□□□ -1.26
SgcbP82349 Gm22811-201ENSMUST00000157468 154 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm24198-201ENSMUST00000157812 108 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm17235-201ENSMUST00000169128 964 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm27034-201ENSMUST00000182552 940 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Mir6922-201ENSMUST00000185099 66 ntBASIC7.19□□□□□ -1.26
SgcbP82349 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm42861-201ENSMUST00000199596 634 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
SgcbP82349 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.19□□□□□ -1.26
SgcbP82349 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.19□□□□□ -1.26
SgcbP82349 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC7.19□□□□□ -1.26
SgcbP82349 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC7.19□□□□□ -1.26
SgcbP82349 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC7.19□□□□□ -1.26
SgcbP82349 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.19□□□□□ -1.26
SgcbP82349 AC156790.3-201ENSMUST00000226200 254 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SgcbP82349 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm26003-201ENSMUST00000083061 113 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SgcbP82349 Gm44986-201ENSMUST00000206292 2829 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SgcbP82349 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm37074-201ENSMUST00000193444 1843 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SgcbP82349 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 AC154227.2-201ENSMUST00000228677 2101 ntBASIC7.19□□□□□ -1.26
SgcbP82349 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SgcbP82349 Gm42519-201ENSMUST00000199282 3656 ntBASIC7.19□□□□□ -1.26
SgcbP82349 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.18□□□□□ -1.26
SgcbP82349 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SgcbP82349 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Zfp820-201ENSMUST00000084141 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm22271-201ENSMUST00000104035 128 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm24257-201ENSMUST00000104472 131 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm14879-201ENSMUST00000117308 507 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm12604-201ENSMUST00000118382 380 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms