Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Shmt1P50431 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm15484-201ENSMUST00000118871 828 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Gm12710-201ENSMUST00000119011 216 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm3208-201ENSMUST00000168281 427 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm8581-201ENSMUST00000188636 890 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm29107-201ENSMUST00000190910 347 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm37295-201ENSMUST00000192186 109 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.72□□□□□ -1.17
Shmt1P50431 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 AC122924.1-201ENSMUST00000222044 163 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.72□□□□□ -1.17
Shmt1P50431 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Shmt1P50431 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Shmt1P50431 Gm45885-202ENSMUST00000211520 1383 ntBASIC7.71□□□□□ -1.17
Shmt1P50431 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.71□□□□□ -1.17
Shmt1P50431 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Shmt1P50431 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Shmt1P50431 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Shmt1P50431 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Shmt1P50431 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Shmt1P50431 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Shmt1P50431 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Shmt1P50431 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Shmt1P50431 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Shmt1P50431 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Shmt1P50431 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Shmt1P50431 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Shmt1P50431 Gm23437-201ENSMUST00000104036 127 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.71□□□□□ -1.18
Shmt1P50431 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.71□□□□□ -1.18
Shmt1P50431 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Shmt1P50431 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Gm15739-201ENSMUST00000118049 872 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm12535-201ENSMUST00000121025 484 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm15538-201ENSMUST00000121410 313 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Gm6434-201ENSMUST00000163316 372 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm24300-201ENSMUST00000177809 109 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm24017-201ENSMUST00000178726 109 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm21182-201ENSMUST00000178899 794 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm23952-201ENSMUST00000179380 109 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Pea15b-201ENSMUST00000182806 387 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.71□□□□□ -1.18
Shmt1P50431 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Gm8539-201ENSMUST00000199822 501 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Gm6581-201ENSMUST00000214545 260 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm19217-201ENSMUST00000218238 328 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Gm8275-201ENSMUST00000219732 424 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 AV026068-219ENSMUST00000224148 933 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 AC154424.1-201ENSMUST00000225883 799 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Shmt1P50431 Gm43216-201ENSMUST00000196295 1333 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Shmt1P50431 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
Shmt1P50431 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.71□□□□□ -1.18
Shmt1P50431 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.71□□□□□ -1.18
Shmt1P50431 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms