Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sox6P40645 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sox6P40645 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.75□□□□□ -1.33
Sox6P40645 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sox6P40645 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Sox6P40645 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Sox6P40645 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Sox6P40645 Gm23484-201ENSMUST00000104178 131 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm6746-201ENSMUST00000108774 483 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm6490-201ENSMUST00000111862 461 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm22152-201ENSMUST00000116966 125 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Mir669e-201ENSMUST00000117003 119 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm6491-201ENSMUST00000118273 990 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm12642-201ENSMUST00000121098 876 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox6P40645 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Sox6P40645 Gm18709-201ENSMUST00000180564 489 ntBASIC6.74□□□□□ -1.33
Sox6P40645 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm22149-202ENSMUST00000196259 137 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Gm45432-201ENSMUST00000210391 416 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm7392-201ENSMUST00000217815 345 ntBASIC6.74□□□□□ -1.33
Sox6P40645 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.74□□□□□ -1.33
Sox6P40645 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.74□□□□□ -1.33
Sox6P40645 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox6P40645 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox6P40645 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm17199-201ENSMUST00000097296 416 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox6P40645 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.74□□□□□ -1.33
Sox6P40645 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox6P40645 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Sox6P40645 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox6P40645 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.73□□□□□ -1.33
Sox6P40645 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Gm15481-201ENSMUST00000120264 539 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Gm12754-201ENSMUST00000121908 454 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.73□□□□□ -1.33
Sox6P40645 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox6P40645 Gm25164-201ENSMUST00000158908 116 ntBASIC6.73□□□□□ -1.33
Sox6P40645 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms