Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pde6aP27664 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Pde6aP27664 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pde6aP27664 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Pde6aP27664 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.42□□□□□ -1.06
Pde6aP27664 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Pde6aP27664 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Pde6aP27664 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm16418-201ENSMUST00000118577 171 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Gm10913-201ENSMUST00000133732 463 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm28186-201ENSMUST00000187447 679 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Gm28443-201ENSMUST00000189081 698 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm37322-201ENSMUST00000193409 337 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm29755-201ENSMUST00000196976 948 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC8.41□□□□□ -1.06
Pde6aP27664 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm44590-201ENSMUST00000206161 391 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.41□□□□□ -1.06
Pde6aP27664 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Pde6aP27664 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.41□□□□□ -1.06
Pde6aP27664 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Pde6aP27664 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pde6aP27664 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.41□□□□□ -1.06
Pde6aP27664 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.4□□□□□ -1.06
Pde6aP27664 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Pde6aP27664 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Pde6aP27664 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.4□□□□□ -1.06
Pde6aP27664 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm25546-201ENSMUST00000103977 132 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm8812-201ENSMUST00000118496 412 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm12944-201ENSMUST00000119262 463 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm15586-201ENSMUST00000121218 528 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm26480-201ENSMUST00000122619 297 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm23657-201ENSMUST00000122623 294 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm22552-201ENSMUST00000157796 337 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm16026-205ENSMUST00000162923 641 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm8101-201ENSMUST00000192796 478 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm43894-201ENSMUST00000203274 688 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm8804-201ENSMUST00000212292 798 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.4□□□□□ -1.06
Pde6aP27664 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm17611-202ENSMUST00000220613 814 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.4□□□□□ -1.06
Pde6aP27664 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Gm5514-201ENSMUST00000060477 306 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Pde6aP27664 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Pde6aP27664 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.4□□□□□ -1.06
Pde6aP27664 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pde6aP27664 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 358.8 ms