Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdx1P18111 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdx1P18111 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdx1P18111 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm24143-201ENSMUST00000082633 145 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Mir412-201ENSMUST00000083636 80 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm15433-201ENSMUST00000097671 891 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Cdx1P18111 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdx1P18111 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm18908-201ENSMUST00000207125 1483 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Cdx1P18111 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm12344-201ENSMUST00000117087 329 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Gm12583-201ENSMUST00000120677 853 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm22690-201ENSMUST00000175054 110 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Gm26505-201ENSMUST00000176208 166 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC5.9□□□□□ -1.46
Cdx1P18111 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Gm5920-201ENSMUST00000187390 853 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm8575-201ENSMUST00000210262 521 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 CT025561.1-201ENSMUST00000214972 674 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Gm21321-201ENSMUST00000220179 446 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC5.9□□□□□ -1.46
Cdx1P18111 AC154747.4-202ENSMUST00000223826 852 ntBASIC5.9□□□□□ -1.46
Cdx1P18111 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdx1P18111 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdx1P18111 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
Cdx1P18111 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC5.9□□□□□ -1.47
Cdx1P18111 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.9□□□□□ -1.47
Cdx1P18111 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC5.9□□□□□ -1.47
Cdx1P18111 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.9□□□□□ -1.47
Cdx1P18111 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Cdx1P18111 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdx1P18111 AC122878.1-201ENSMUST00000227716 1460 ntBASIC5.9□□□□□ -1.47
Cdx1P18111 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
Cdx1P18111 AC154141.1-201ENSMUST00000208403 4136 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms