Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Snora21-201ENSMUST00000082967 137 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Mir296-201ENSMUST00000083587 79 ntBASIC9.3□□□□□ -0.92
Hoxc9P09633 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Hoxc9P09633 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hoxc9P09633 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Hoxc9P09633 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxc9P09633 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm22284-201ENSMUST00000104132 132 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm23768-201ENSMUST00000104440 131 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm11609-201ENSMUST00000121926 793 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm14380-201ENSMUST00000122298 431 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm23756-201ENSMUST00000157582 114 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC9.29□□□□□ -0.92
Hoxc9P09633 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.29□□□□□ -0.92
Hoxc9P09633 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm18430-201ENSMUST00000197534 682 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC9.29□□□□□ -0.92
Hoxc9P09633 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 n-R5s95-201ENSMUST00000082684 118 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm22581-201ENSMUST00000083735 136 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm37496-201ENSMUST00000191930 2509 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC9.29□□□□□ -0.92
Hoxc9P09633 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Hoxc9P09633 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 Gm5841-201ENSMUST00000195307 2177 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxc9P09633 AC154141.1-201ENSMUST00000208403 4136 ntBASIC9.29□□□□□ -0.92
Hoxc9P09633 AC129308.1-201ENSMUST00000223800 2309 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Pramel-201ENSMUST00000118979 1383 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Mir674-201ENSMUST00000102421 100 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm14116-201ENSMUST00000117733 805 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm11445-201ENSMUST00000119101 532 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm11796-201ENSMUST00000120208 972 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm22275-201ENSMUST00000122470 310 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Mir6244-201ENSMUST00000184156 117 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm18040-201ENSMUST00000217922 827 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 AC163667.1-201ENSMUST00000225201 1289 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.28□□□□□ -0.92
Hoxc9P09633 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Hoxc9P09633 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxc9P09633 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms