Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm43211-201ENSMUST00000196901 1899 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Dalir-201ENSMUST00000188773 2170 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm13486-201ENSMUST00000119910 282 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm13221-201ENSMUST00000121712 430 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm16113-201ENSMUST00000159629 372 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm9027-201ENSMUST00000165914 661 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm18808-201ENSMUST00000173316 462 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm25640-201ENSMUST00000175378 125 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm29562-201ENSMUST00000190113 904 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm18183-201ENSMUST00000191024 615 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm28060-201ENSMUST00000191554 189 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm37213-201ENSMUST00000193077 586 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm42708-201ENSMUST00000196332 905 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm26203-201ENSMUST00000082911 114 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NpcdF8VQB8 CT025642.2-201ENSMUST00000225009 1649 ntBASIC9.15□□□□□ -0.94
NpcdF8VQB8 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC9.15□□□□□ -0.94
NpcdF8VQB8 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.15□□□□□ -0.95
NpcdF8VQB8 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
NpcdF8VQB8 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Gm42975-201ENSMUST00000200612 1491 ntBASIC9.15□□□□□ -0.95
NpcdF8VQB8 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
NpcdF8VQB8 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
NpcdF8VQB8 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Pramel-201ENSMUST00000118979 1383 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm36938-201ENSMUST00000191612 2696 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm22953-201ENSMUST00000116724 101 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm5754-201ENSMUST00000118774 892 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm11245-201ENSMUST00000119419 1037 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm6142-201ENSMUST00000120290 325 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm16016-201ENSMUST00000120831 550 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm24383-201ENSMUST00000122691 333 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm16129-201ENSMUST00000152628 486 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm22226-201ENSMUST00000157355 109 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm17786-201ENSMUST00000182000 427 ntBASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
NpcdF8VQB8 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 281.5 ms