Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Gm9848-201ENSMUST00000053398 259 ntBASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col6a3E9PWQ3 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm15233-201ENSMUST00000118747 400 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm4332-201ENSMUST00000196114 346 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm18805-201ENSMUST00000206872 655 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm24454-201ENSMUST00000083349 132 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm25795-201ENSMUST00000104421 132 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 BC049739-201ENSMUST00000202626 660 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm12135-201ENSMUST00000119170 466 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm7212-201ENSMUST00000120817 348 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm6081-201ENSMUST00000134472 489 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm24228-201ENSMUST00000158829 129 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm45082-201ENSMUST00000206082 601 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm36758-201ENSMUST00000222594 310 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col6a3E9PWQ3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 AC122346.2-201ENSMUST00000224326 2931 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28958-201ENSMUST00000185864 703 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm18447-201ENSMUST00000187501 307 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm8860-201ENSMUST00000193160 445 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm19033-201ENSMUST00000208516 964 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 290.5 ms