Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm17047-201ENSMUST00000167709 430 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Mir5100-201ENSMUST00000174993 64 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm5445-201ENSMUST00000180224 480 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Mir8114-201ENSMUST00000183582 111 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Gm24613-201ENSMUST00000083266 130 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim3Q9R1R2 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.84□□□□□ -1.32
Trim3Q9R1R2 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Trim3Q9R1R2 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm23701-201ENSMUST00000103893 110 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm15586-201ENSMUST00000121218 528 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm22206-201ENSMUST00000158612 116 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm7502-201ENSMUST00000169235 733 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Mir6409-201ENSMUST00000184957 92 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm8004-201ENSMUST00000187782 617 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm19035-202ENSMUST00000194575 959 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm20900-201ENSMUST00000078729 472 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Trim3Q9R1R2 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim3Q9R1R2 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms