Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm14103-201ENSMUST00000119075 366 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm11850-201ENSMUST00000119679 479 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm12587-201ENSMUST00000120180 427 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm2976-201ENSMUST00000160362 513 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm6264-201ENSMUST00000160802 624 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm6100-201ENSMUST00000180253 403 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm4850-201ENSMUST00000185684 559 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm21181-201ENSMUST00000186249 330 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm18537-201ENSMUST00000205709 989 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm4259-201ENSMUST00000206489 758 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm45551-201ENSMUST00000211459 928 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm45908-201ENSMUST00000212977 1177 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm19161-201ENSMUST00000217958 737 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 AC158981.3-201ENSMUST00000226844 1024 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 AC122035.2-201ENSMUST00000228698 462 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm25189-201ENSMUST00000083911 164 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm16421-201ENSMUST00000117616 1557 ntBASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Gm17229-202ENSMUST00000166792 1753 ntBASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Adam9-201ENSMUST00000084032 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
Nkx6-1Q99MA9 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm45263-201ENSMUST00000210377 1375 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 AC124675.1-201ENSMUST00000226263 1390 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 AC164297.4-201ENSMUST00000224225 1307 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm14904-201ENSMUST00000117067 335 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm12851-201ENSMUST00000117920 421 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm13156-201ENSMUST00000118348 321 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm13521-201ENSMUST00000118922 866 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm13444-201ENSMUST00000119445 522 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm12140-201ENSMUST00000121214 544 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC7.39□□□□□ -1.23
Nkx6-1Q99MA9 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms