Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.31□□□□□ -0.92
RtcbQ99LF4 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RtcbQ99LF4 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.31□□□□□ -0.92
RtcbQ99LF4 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
RtcbQ99LF4 AC159196.3-201ENSMUST00000224307 1841 ntBASIC9.31□□□□□ -0.92
RtcbQ99LF4 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC9.31□□□□□ -0.92
RtcbQ99LF4 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RtcbQ99LF4 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm6382-201ENSMUST00000118873 942 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm12593-201ENSMUST00000120981 743 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm3208-201ENSMUST00000168281 427 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm44232-201ENSMUST00000204537 225 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm7688-201ENSMUST00000212857 337 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 AC124489.1-201ENSMUST00000225852 526 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 CT025630.2-201ENSMUST00000228293 487 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm18726-201ENSMUST00000218175 2010 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.3□□□□□ -0.92
RtcbQ99LF4 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
RtcbQ99LF4 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm38099-201ENSMUST00000193280 3170 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm12944-201ENSMUST00000119262 463 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm15529-201ENSMUST00000121833 994 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm28929-201ENSMUST00000185330 1193 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm7891-201ENSMUST00000190284 843 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm8101-201ENSMUST00000192796 478 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm21461-201ENSMUST00000200382 863 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm44902-201ENSMUST00000206177 805 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm44615-201ENSMUST00000206548 358 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm44690-201ENSMUST00000207984 382 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm7351-201ENSMUST00000210745 580 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 AC142113.2-201ENSMUST00000217425 748 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 AC155709.1-201ENSMUST00000218794 162 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 Gm3213-201ENSMUST00000219296 441 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RtcbQ99LF4 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 AC172989.1-201ENSMUST00000226387 513 ntBASIC9.29□□□□□ -0.92
RtcbQ99LF4 AC164597.2-201ENSMUST00000226738 603 ntBASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms