Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm22438-201ENSMUST00000104049 132 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm14727-201ENSMUST00000118526 525 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm12104-201ENSMUST00000120359 979 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm14721-201ENSMUST00000121381 525 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm2735-201ENSMUST00000136133 277 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm6428-201ENSMUST00000161062 345 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Mir378d-201ENSMUST00000184232 110 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Mir6403-201ENSMUST00000185007 129 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm37355-201ENSMUST00000193345 606 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm38337-201ENSMUST00000193986 599 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 AC105169.1-201ENSMUST00000218912 1294 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm18960-201ENSMUST00000222962 713 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Rab11fip3Q8CHD8 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Gm6743-201ENSMUST00000117345 1066 ntBASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Gm28952-201ENSMUST00000189285 681 ntBASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Igkv4-77-201ENSMUST00000199410 352 ntBASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Gm6681-201ENSMUST00000205215 607 ntBASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Gm11342-203ENSMUST00000224879 1324 ntBASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 AC159301.1-202ENSMUST00000225860 2133 ntBASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Rab11fip3Q8CHD8 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm43766-201ENSMUST00000200590 5417 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm13444-201ENSMUST00000119445 522 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm12477-201ENSMUST00000121221 571 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm14728-201ENSMUST00000122196 492 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm24382-201ENSMUST00000122698 107 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm25505-201ENSMUST00000157220 246 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm22604-201ENSMUST00000157604 311 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm16027-201ENSMUST00000161618 758 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Olfr331-202ENSMUST00000170501 957 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm18699-201ENSMUST00000190713 243 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm37260-201ENSMUST00000193748 1251 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm35108-201ENSMUST00000194321 699 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm38217-201ENSMUST00000194358 910 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm33191-201ENSMUST00000195604 699 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm7285-201ENSMUST00000198801 580 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm43928-201ENSMUST00000203737 409 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm5154-201ENSMUST00000203971 399 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm43926-201ENSMUST00000203978 430 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm44892-201ENSMUST00000208595 488 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC9.51□□□□□ -0.89
Rab11fip3Q8CHD8 Gm4247-201ENSMUST00000211441 1042 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms