Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm16221-201ENSMUST00000117331 393 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm15778-201ENSMUST00000118469 608 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm12535-201ENSMUST00000121025 484 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm23007-201ENSMUST00000158951 177 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm2976-201ENSMUST00000160362 513 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm22408-201ENSMUST00000174925 65 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm27026-201ENSMUST00000183003 892 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm8004-201ENSMUST00000187782 617 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm43906-201ENSMUST00000203194 906 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm44590-201ENSMUST00000206161 391 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm7368-201ENSMUST00000213307 367 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm6562-201ENSMUST00000221903 464 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm25189-201ENSMUST00000083911 164 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm14891-201ENSMUST00000117378 596 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm15481-201ENSMUST00000120264 539 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm6931-201ENSMUST00000183103 371 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm18875-201ENSMUST00000188563 882 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm5050-201ENSMUST00000197164 775 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm43377-201ENSMUST00000201640 455 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm9652-201ENSMUST00000209345 163 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm45509-201ENSMUST00000209624 1229 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gm5250-201ENSMUST00000059065 321 ntBASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms