Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Atg4aQ8C9S8 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Atg4aQ8C9S8 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.65□□□□□ -1.03
Atg4aQ8C9S8 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Atg4aQ8C9S8 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Atg4aQ8C9S8 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Atg4aQ8C9S8 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Atg4aQ8C9S8 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm17786-201ENSMUST00000182000 427 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Mir6972-201ENSMUST00000184774 64 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm18860-201ENSMUST00000212029 764 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm19056-201ENSMUST00000218220 797 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 CT009515.1-201ENSMUST00000228127 586 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.64□□□□□ -1.03
Atg4aQ8C9S8 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm25546-201ENSMUST00000103977 132 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm26417-201ENSMUST00000104274 135 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm26416-201ENSMUST00000104280 134 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm13196-201ENSMUST00000118297 379 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Mir1930-201ENSMUST00000158799 84 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm26959-201ENSMUST00000182376 978 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm8524-201ENSMUST00000186232 379 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm42580-201ENSMUST00000197223 753 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm29759-201ENSMUST00000205860 327 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gm9604-201ENSMUST00000211175 433 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 AC153961.1-201ENSMUST00000217760 385 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Atg4aQ8C9S8 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Atg4aQ8C9S8 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 140.3 ms