Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pcdh19Q80TF3 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm5386-201ENSMUST00000121749 2450 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm12834-201ENSMUST00000121855 2829 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 AC131743.4-201ENSMUST00000221638 1553 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 AC170188.1-201ENSMUST00000223710 1963 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm14584-201ENSMUST00000118956 637 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm14749-201ENSMUST00000121269 333 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm22224-201ENSMUST00000157357 93 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm28688-201ENSMUST00000187301 268 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm18349-201ENSMUST00000187440 904 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm3496-201ENSMUST00000188283 745 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm17867-201ENSMUST00000188981 391 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm7897-201ENSMUST00000193981 554 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm6522-201ENSMUST00000197160 1203 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 AC124542.1-201ENSMUST00000205588 908 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Btnl10-201ENSMUST00000020792 1028 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Olfr888-201ENSMUST00000075228 945 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm6054-201ENSMUST00000078052 378 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm22575-201ENSMUST00000082981 110 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm17821-201ENSMUST00000223448 1693 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm42847-201ENSMUST00000201732 2553 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Synpo2-201ENSMUST00000051443 3719 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Gm43071-201ENSMUST00000197233 2032 ntBASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
Pcdh19Q80TF3 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Pcdh19Q80TF3 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms