Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm44423-201ENSMUST00000203746 3158 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm12834-201ENSMUST00000121855 2829 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm9776-201ENSMUST00000059598 2980 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC6.65□□□□□ -1.34
Col8a1Q00780 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm23706-201ENSMUST00000104369 82 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm12517-201ENSMUST00000122082 425 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm23773-201ENSMUST00000158985 296 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm8550-201ENSMUST00000161621 653 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Mir6911-201ENSMUST00000184241 69 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm29362-201ENSMUST00000187898 133 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm29273-201ENSMUST00000188880 262 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm6680-201ENSMUST00000192789 950 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC6.65□□□□□ -1.34
Col8a1Q00780 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm18955-201ENSMUST00000223173 649 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Col8a1Q00780 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gm5250-201ENSMUST00000059065 321 ntBASIC6.65□□□□□ -1.34
Col8a1Q00780 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Col8a1Q00780 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col8a1Q00780 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Col8a1Q00780 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Col8a1Q00780 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Col8a1Q00780 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Col8a1Q00780 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.65□□□□□ -1.35
Col8a1Q00780 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Gm44835-201ENSMUST00000205544 3181 ntBASIC6.65□□□□□ -1.35
Col8a1Q00780 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col8a1Q00780 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm12183-201ENSMUST00000120566 1848 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm44986-201ENSMUST00000206292 2829 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col8a1Q00780 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm25757-201ENSMUST00000103986 123 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col8a1Q00780 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm13726-201ENSMUST00000121278 794 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Col8a1Q00780 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm27155-201ENSMUST00000183716 898 ntBASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC6.64□□□□□ -1.35
Col8a1Q00780 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms