Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm44046-201ENSMUST00000203145 2678 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm24071-201ENSMUST00000104520 132 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm11207-201ENSMUST00000117824 414 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm16044-201ENSMUST00000118475 450 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.31□□□□□ -1.08
Hmgb1P63158 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm18558-201ENSMUST00000186253 1214 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm37247-201ENSMUST00000192549 730 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm36638-201ENSMUST00000193295 400 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm19035-202ENSMUST00000194575 959 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm6366-201ENSMUST00000198766 826 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm10015-201ENSMUST00000072570 465 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm24143-201ENSMUST00000082633 145 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.31□□□□□ -1.08
Hmgb1P63158 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Hmgb1P63158 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Hmgb1P63158 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 AC154627.2-201ENSMUST00000227028 4669 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm14891-201ENSMUST00000117378 596 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm13487-201ENSMUST00000122240 864 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm25265-201ENSMUST00000158520 347 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Hmgb1P63158 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb1P63158 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm8004-201ENSMUST00000187782 617 ntBASIC8.3□□□□□ -1.08
Hmgb1P63158 Gm37339-201ENSMUST00000194142 392 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms