Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm4956-202ENSMUST00000178869 672 ntBASIC9.71□□□□□ -0.86
Nphp4P59240 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nphp4P59240 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nphp4P59240 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.71□□□□□ -0.86
Nphp4P59240 AC138765.3-201ENSMUST00000227981 423 ntBASIC9.71□□□□□ -0.86
Nphp4P59240 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nphp4P59240 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Nphp4P59240 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nphp4P59240 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nphp4P59240 Gm14976-201ENSMUST00000117055 1394 ntBASIC9.71□□□□□ -0.86
Nphp4P59240 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nphp4P59240 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.86
Nphp4P59240 C78859-201ENSMUST00000212800 5943 ntBASIC9.71□□□□□ -0.86
Nphp4P59240 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Nphp4P59240 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Nphp4P59240 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Nphp4P59240 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Nphp4P59240 Gm25877-201ENSMUST00000104326 129 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Apc-ps1-201ENSMUST00000119356 470 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Gm11553-201ENSMUST00000120682 240 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Gm14489-201ENSMUST00000120868 901 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC9.7□□□□□ -0.86
Nphp4P59240 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Gm28929-201ENSMUST00000185330 1193 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Gm37383-201ENSMUST00000191750 745 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Gm44342-201ENSMUST00000196874 129 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.7□□□□□ -0.86
Nphp4P59240 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC9.7□□□□□ -0.86
Nphp4P59240 Gm44383-201ENSMUST00000198940 129 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Nphp4P59240 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Gm2754-201ENSMUST00000223383 589 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 CT009711.4-201ENSMUST00000225685 198 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Nphp4P59240 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Gm11853-201ENSMUST00000119687 1384 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC9.7□□□□□ -0.86
Nphp4P59240 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nphp4P59240 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC9.7□□□□□ -0.86
Nphp4P59240 AU020206-202ENSMUST00000206358 3009 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.7□□□□□ -0.86
Nphp4P59240 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm37984-201ENSMUST00000191641 3733 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 Gm44916-201ENSMUST00000208664 2194 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm9030-201ENSMUST00000218405 2410 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm9029-201ENSMUST00000219232 2410 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nphp4P59240 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nphp4P59240 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nphp4P59240 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm10364-202ENSMUST00000153034 1001 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm44411-201ENSMUST00000204172 349 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Nphp4P59240 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 AC069561.1-201ENSMUST00000213750 424 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 AC151730.1-201ENSMUST00000226106 448 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 AC123533.2-201ENSMUST00000228176 375 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.69□□□□□ -0.86
Nphp4P59240 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nphp4P59240 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nphp4P59240 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Nphp4P59240 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC9.68□□□□□ -0.86
Nphp4P59240 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms