Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sh3bp1P55194 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Sh3bp1P55194 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Sh3bp1P55194 Gm37199-201ENSMUST00000193881 4065 ntBASIC8.17□□□□□ -1.1
Sh3bp1P55194 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Sh3bp1P55194 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Mir688-201ENSMUST00000102055 75 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Mir763-201ENSMUST00000103249 120 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm13742-201ENSMUST00000118805 457 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm11688-201ENSMUST00000122145 308 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm23207-201ENSMUST00000158665 102 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm36961-201ENSMUST00000191980 132 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm38305-201ENSMUST00000194825 223 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm19011-201ENSMUST00000221777 808 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 AC154484.2-201ENSMUST00000228359 818 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Gm25852-201ENSMUST00000082790 130 ntBASIC8.16□□□□□ -1.1
Sh3bp1P55194 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sh3bp1P55194 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 AC154734.1-201ENSMUST00000219957 2141 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm6746-201ENSMUST00000108774 483 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm13915-201ENSMUST00000119314 931 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm15251-201ENSMUST00000177947 883 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm28341-201ENSMUST00000190883 472 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm43287-201ENSMUST00000197747 600 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm30708-201ENSMUST00000202183 312 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm4898-201ENSMUST00000218519 832 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Olfr890-201ENSMUST00000079804 945 ntBASIC8.15□□□□□ -1.1
Sh3bp1P55194 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sh3bp1P55194 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms