Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm42734-201ENSMUST00000201656 878 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.47□□□□□ -1.05
Traf1P39428 Gm45100-201ENSMUST00000209153 391 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm9652-201ENSMUST00000209345 163 ntBASIC8.47□□□□□ -1.05
Traf1P39428 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.47□□□□□ -1.05
Traf1P39428 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.47□□□□□ -1.05
Traf1P39428 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Traf1P39428 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Traf1P39428 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Traf1P39428 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.47□□□□□ -1.05
Traf1P39428 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Traf1P39428 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.47□□□□□ -1.05
Traf1P39428 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Traf1P39428 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Traf1P39428 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Traf1P39428 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.46□□□□□ -1.05
Traf1P39428 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Traf1P39428 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Traf1P39428 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Traf1P39428 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.46□□□□□ -1.05
Traf1P39428 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.46□□□□□ -1.05
Traf1P39428 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Traf1P39428 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Traf1P39428 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Traf1P39428 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 Gm25396-201ENSMUST00000103981 133 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm23437-201ENSMUST00000104036 127 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.46□□□□□ -1.06
Traf1P39428 Gm15484-201ENSMUST00000118871 828 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm15188-201ENSMUST00000121264 704 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm14990-201ENSMUST00000122354 445 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.46□□□□□ -1.06
Traf1P39428 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.46□□□□□ -1.06
Traf1P39428 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Gm26046-201ENSMUST00000157312 166 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm23757-201ENSMUST00000158353 100 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.46□□□□□ -1.06
Traf1P39428 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.46□□□□□ -1.06
Traf1P39428 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 Gm45042-201ENSMUST00000207377 211 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm44892-201ENSMUST00000208595 488 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.46□□□□□ -1.06
Traf1P39428 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Traf1P39428 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Traf1P39428 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Traf1P39428 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Traf1P39428 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Traf1P39428 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.46□□□□□ -1.06
Traf1P39428 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.45□□□□□ -1.06
Traf1P39428 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Traf1P39428 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.45□□□□□ -1.06
Traf1P39428 Gm12635-201ENSMUST00000117285 752 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm13545-201ENSMUST00000119044 482 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm12903-201ENSMUST00000121015 544 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm11263-201ENSMUST00000121853 749 ntBASIC8.45□□□□□ -1.06
Traf1P39428 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Gm3611-201ENSMUST00000173687 877 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm20690-201ENSMUST00000177341 315 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm23018-201ENSMUST00000177928 109 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Mir6987-201ENSMUST00000184789 73 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm8004-201ENSMUST00000187782 617 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Gm38337-201ENSMUST00000193986 599 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms