Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm25675-201ENSMUST00000174979 118 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm37349-201ENSMUST00000194205 624 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm43725-201ENSMUST00000200122 369 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col18a1P39061 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col18a1P39061 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Col18a1P39061 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Gm44080-201ENSMUST00000204451 2214 ntBASIC9.44□□□□□ -0.9
Col18a1P39061 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC9.44□□□□□ -0.9
Col18a1P39061 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.44□□□□□ -0.9
Col18a1P39061 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC9.44□□□□□ -0.9
Col18a1P39061 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Col18a1P39061 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Col18a1P39061 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Col18a1P39061 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC9.44□□□□□ -0.9
Col18a1P39061 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC9.44□□□□□ -0.9
Col18a1P39061 Mir1960-201ENSMUST00000157488 78 ntBASIC9.44□□□□□ -0.9
Col18a1P39061 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC9.44□□□□□ -0.9
Col18a1P39061 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC9.44□□□□□ -0.9
Col18a1P39061 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Olfr687-201ENSMUST00000098154 938 ntBASIC9.44□□□□□ -0.9
Col18a1P39061 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Col18a1P39061 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Col18a1P39061 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 AC153959.1-201ENSMUST00000213617 1694 ntBASIC9.44□□□□□ -0.9
Col18a1P39061 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col18a1P39061 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Col18a1P39061 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Col18a1P39061 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Col18a1P39061 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm16112-201ENSMUST00000159075 382 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm8582-201ENSMUST00000164061 789 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm27960-201ENSMUST00000183445 184 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 BC049739-201ENSMUST00000202626 660 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm45514-201ENSMUST00000211531 689 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm46203-201ENSMUST00000218130 478 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Gm6056-201ENSMUST00000221253 488 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Gm9800-201ENSMUST00000052615 336 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Col18a1P39061 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 AC129308.1-201ENSMUST00000223800 2309 ntBASIC9.43□□□□□ -0.9
Col18a1P39061 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC9.43□□□□□ -0.9
Col18a1P39061 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col18a1P39061 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col18a1P39061 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms