Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col2a1P28481 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col2a1P28481 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Col2a1P28481 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col2a1P28481 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.15□□□□□ -1.11
Col2a1P28481 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.15□□□□□ -1.11
Col2a1P28481 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col2a1P28481 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col2a1P28481 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col2a1P28481 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col2a1P28481 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.14□□□□□ -1.11
Col2a1P28481 Gm14070-201ENSMUST00000120773 428 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Gm24176-201ENSMUST00000158928 121 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.14□□□□□ -1.11
Col2a1P28481 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Gm17217-201ENSMUST00000166613 469 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Gm37383-201ENSMUST00000191750 745 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Gm44565-201ENSMUST00000208194 269 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Gm8168-201ENSMUST00000209631 948 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC8.14□□□□□ -1.11
Col2a1P28481 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 CT009495.1-201ENSMUST00000224221 862 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Col2a1P28481 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col2a1P28481 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col2a1P28481 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC8.14□□□□□ -1.11
Col2a1P28481 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.14□□□□□ -1.11
Col2a1P28481 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col2a1P28481 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm25093-201ENSMUST00000103993 132 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Gm11501-201ENSMUST00000118039 581 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.13□□□□□ -1.11
Col2a1P28481 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.13□□□□□ -1.11
Col2a1P28481 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Col2a1P28481 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.13□□□□□ -1.11
Col2a1P28481 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Gm4042-201ENSMUST00000216946 637 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm9315-201ENSMUST00000222696 908 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Col2a1P28481 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm37373-201ENSMUST00000194005 2812 ntBASIC8.13□□□□□ -1.11
Col2a1P28481 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col2a1P28481 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col2a1P28481 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col2a1P28481 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms