Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm7129-201ENSMUST00000117402 997 ntBASIC6.4□□□□□ -1.38
P20040 Gm13521-201ENSMUST00000118922 866 ntBASIC6.4□□□□□ -1.38
P20040 Gm11343-201ENSMUST00000120579 599 ntBASIC6.4□□□□□ -1.38
P20040 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.4□□□□□ -1.38
P20040 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.4□□□□□ -1.38
P20040 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.4□□□□□ -1.38
P20040 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.4□□□□□ -1.38
P20040 Gm25164-201ENSMUST00000158908 116 ntBASIC6.4□□□□□ -1.38
P20040 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm5445-201ENSMUST00000180224 480 ntBASIC6.4□□□□□ -1.38
P20040 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm20111-201ENSMUST00000184830 319 ntBASIC6.4□□□□□ -1.38
P20040 Gm3121-201ENSMUST00000187086 406 ntBASIC6.4□□□□□ -1.38
P20040 Gm28164-201ENSMUST00000190143 442 ntBASIC6.4□□□□□ -1.38
P20040 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm3103-201ENSMUST00000198073 752 ntBASIC6.4□□□□□ -1.38
P20040 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.4□□□□□ -1.38
P20040 Gm43558-201ENSMUST00000200155 210 ntBASIC6.4□□□□□ -1.38
P20040 Gm43812-202ENSMUST00000202701 581 ntBASIC6.4□□□□□ -1.38
P20040 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
P20040 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
P20040 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.4□□□□□ -1.38
P20040 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.4□□□□□ -1.38
P20040 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.4□□□□□ -1.38
P20040 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
P20040 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.4□□□□□ -1.38
P20040 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
P20040 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.4□□□□□ -1.39
P20040 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.4□□□□□ -1.39
P20040 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
P20040 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.4□□□□□ -1.39
P20040 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.4□□□□□ -1.39
P20040 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
P20040 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.39□□□□□ -1.39
P20040 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P20040 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.39□□□□□ -1.39
P20040 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
P20040 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P20040 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P20040 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Gm23701-201ENSMUST00000103893 110 ntBASIC6.39□□□□□ -1.39
P20040 Gm23485-201ENSMUST00000104181 155 ntBASIC6.39□□□□□ -1.39
P20040 Gm23323-201ENSMUST00000104471 133 ntBASIC6.39□□□□□ -1.39
P20040 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Gm15054-201ENSMUST00000117393 281 ntBASIC6.39□□□□□ -1.39
P20040 Gm11416-201ENSMUST00000119111 863 ntBASIC6.39□□□□□ -1.39
P20040 Gm15481-201ENSMUST00000120264 539 ntBASIC6.39□□□□□ -1.39
P20040 Gm10157-201ENSMUST00000139408 343 ntBASIC6.39□□□□□ -1.39
P20040 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Gm23027-201ENSMUST00000158771 158 ntBASIC6.39□□□□□ -1.39
P20040 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.39□□□□□ -1.39
P20040 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.39□□□□□ -1.39
P20040 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.39□□□□□ -1.39
P20040 Gm28006-201ENSMUST00000183841 122 ntBASIC6.39□□□□□ -1.39
P20040 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.39□□□□□ -1.39
P20040 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.39□□□□□ -1.39
P20040 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.39□□□□□ -1.39
P20040 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.39□□□□□ -1.39
P20040 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.39□□□□□ -1.39
P20040 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.39□□□□□ -1.39
P20040 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
P20040 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P20040 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P20040 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
P20040 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.39□□□□□ -1.39
P20040 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P20040 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
P20040 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
P20040 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms