Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.76□□□□□ -1.49
Sdc1P18828 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Sdc1P18828 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm43322-201ENSMUST00000196232 1612 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.75□□□□□ -1.49
Sdc1P18828 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Sdc1P18828 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm25607-201ENSMUST00000104020 127 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm11225-201ENSMUST00000118903 1049 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm15753-201ENSMUST00000119241 1062 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm12736-201ENSMUST00000119330 236 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm8682-201ENSMUST00000121310 498 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm11662-201ENSMUST00000121389 1193 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Defa-ps10-201ENSMUST00000121649 171 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm23031-201ENSMUST00000157998 119 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm8357-201ENSMUST00000181115 1011 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm6077-201ENSMUST00000196008 499 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm2939-201ENSMUST00000198496 478 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm42861-201ENSMUST00000199596 634 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm44203-201ENSMUST00000203134 307 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm44566-201ENSMUST00000207638 304 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm2767-201ENSMUST00000209582 473 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm18562-201ENSMUST00000209949 915 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm5609-201ENSMUST00000210008 1267 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.75□□□□□ -1.49
Sdc1P18828 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.75□□□□□ -1.49
Sdc1P18828 AC167202.2-201ENSMUST00000220155 296 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Gm9315-201ENSMUST00000222696 908 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 AC132863.1-201ENSMUST00000228413 751 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Sdc1P18828 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sdc1P18828 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sdc1P18828 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.75□□□□□ -1.49
Sdc1P18828 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Sdc1P18828 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sdc1P18828 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.75□□□□□ -1.49
Sdc1P18828 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Sdc1P18828 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Sdc1P18828 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm24071-201ENSMUST00000104520 132 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm13552-201ENSMUST00000118837 417 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Kcnd3os-202ENSMUST00000143893 718 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms