Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Gm23117-201ENSMUST00000158482 108 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdx1P18111 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Cdx1P18111 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Ighv1-17-201ENSMUST00000194435 350 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdx1P18111 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Gm42965-201ENSMUST00000201254 250 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Gm43934-201ENSMUST00000205095 388 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC5.92□□□□□ -1.46
Cdx1P18111 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC5.92□□□□□ -1.46
Cdx1P18111 Gm9354-201ENSMUST00000209075 468 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC5.92□□□□□ -1.46
Cdx1P18111 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC5.92□□□□□ -1.46
Cdx1P18111 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Cdx1P18111 AC140208.1-201ENSMUST00000226609 285 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 AC101831.1-201ENSMUST00000228245 691 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Gm7086-202ENSMUST00000228849 506 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdx1P18111 Gm9801-201ENSMUST00000054860 408 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdx1P18111 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.92□□□□□ -1.46
Cdx1P18111 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdx1P18111 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdx1P18111 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
Cdx1P18111 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Cdx1P18111 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.92□□□□□ -1.46
Cdx1P18111 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdx1P18111 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.92□□□□□ -1.46
Cdx1P18111 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdx1P18111 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm7803-201ENSMUST00000117176 1015 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm12985-201ENSMUST00000118376 183 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm15836-201ENSMUST00000119952 793 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm8084-201ENSMUST00000120807 752 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm11688-201ENSMUST00000122145 308 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm24748-201ENSMUST00000157836 108 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm24347-201ENSMUST00000158711 142 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm8304-201ENSMUST00000185744 584 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm20813-201ENSMUST00000186646 705 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm28149-201ENSMUST00000187102 378 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm21923-201ENSMUST00000188455 696 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm28768-201ENSMUST00000189034 378 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm6750-201ENSMUST00000189273 268 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm42667-201ENSMUST00000196132 234 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm5307-201ENSMUST00000204772 760 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm39121-201ENSMUST00000208847 525 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm6909-201ENSMUST00000209825 989 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdx1P18111 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC5.91□□□□□ -1.46
Cdx1P18111 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdx1P18111 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Gm9289-201ENSMUST00000221269 606 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 AC159263.2-201ENSMUST00000221593 411 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 AC192333.4-201ENSMUST00000224269 981 ntBASIC5.91□□□□□ -1.46
Cdx1P18111 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdx1P18111 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms