Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC7.14□□□□□ -1.27
Lire1P11260 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm18973-201ENSMUST00000205814 511 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm44550-201ENSMUST00000207311 2058 ntBASIC7.14□□□□□ -1.27
Lire1P11260 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Gm45283-201ENSMUST00000210593 628 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.14□□□□□ -1.27
Lire1P11260 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.14□□□□□ -1.27
Lire1P11260 AC123658.1-201ENSMUST00000228364 867 ntBASIC7.14□□□□□ -1.27
Lire1P11260 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Lire1P11260 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Lire1P11260 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lire1P11260 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Lire1P11260 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.13□□□□□ -1.27
Lire1P11260 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.13□□□□□ -1.27
Lire1P11260 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm24334-201ENSMUST00000104210 128 ntBASIC7.13□□□□□ -1.27
Lire1P11260 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm6490-201ENSMUST00000111862 461 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm11558-201ENSMUST00000118454 459 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Lire1P11260 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm24994-201ENSMUST00000157414 121 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm24883-201ENSMUST00000158391 281 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm24083-201ENSMUST00000175174 120 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC7.13□□□□□ -1.27
Lire1P11260 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm28114-201ENSMUST00000187232 379 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.13□□□□□ -1.27
Lire1P11260 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm17979-201ENSMUST00000196646 611 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm22897-202ENSMUST00000197782 127 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm33096-201ENSMUST00000210189 493 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Gm21941-201ENSMUST00000221121 562 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm18629-201ENSMUST00000222496 884 ntBASIC7.13□□□□□ -1.27
Lire1P11260 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 AC151982.1-201ENSMUST00000223546 464 ntBASIC7.13□□□□□ -1.27
Lire1P11260 AC122533.2-201ENSMUST00000223772 545 ntBASIC7.13□□□□□ -1.27
Lire1P11260 AC126805.1-201ENSMUST00000225142 262 ntBASIC7.13□□□□□ -1.27
Lire1P11260 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lire1P11260 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Lire1P11260 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lire1P11260 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Lire1P11260 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.13□□□□□ -1.27
Lire1P11260 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Lire1P11260 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.13□□□□□ -1.27
Lire1P11260 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lire1P11260 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.12□□□□□ -1.27
Lire1P11260 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms