Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm14865-201ENSMUST00000117523 494 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 Gm14070-201ENSMUST00000120773 428 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Col1a1P11087 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm37295-201ENSMUST00000192186 109 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 Gm18952-201ENSMUST00000194471 846 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 Gm3511-201ENSMUST00000199823 204 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 CT009713.1-201ENSMUST00000224828 853 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm24032-201ENSMUST00000083932 159 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Col1a1P11087 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
Col1a1P11087 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.43□□□□□ -1.06
Col1a1P11087 AC132474.1-201ENSMUST00000214407 3686 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Col1a1P11087 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col1a1P11087 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm15311-201ENSMUST00000119682 282 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm15305-201ENSMUST00000120354 288 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm24228-201ENSMUST00000158829 129 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Gm6921-201ENSMUST00000161478 435 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm4373-201ENSMUST00000178571 556 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Gm7426-201ENSMUST00000179046 404 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC8.43□□□□□ -1.06
Col1a1P11087 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Col1a1P11087 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Gm8607-201ENSMUST00000221864 431 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 AC073562.1-201ENSMUST00000222117 401 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.43□□□□□ -1.06
Col1a1P11087 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 Gm5386-201ENSMUST00000121749 2450 ntBASIC8.43□□□□□ -1.06
Col1a1P11087 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.43□□□□□ -1.06
Col1a1P11087 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.43□□□□□ -1.06
Col1a1P11087 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm43221-201ENSMUST00000197612 2071 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm22267-201ENSMUST00000104008 131 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm15216-201ENSMUST00000118058 277 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm14375-201ENSMUST00000119490 855 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm13357-201ENSMUST00000120528 537 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm6451-201ENSMUST00000121488 717 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm16027-201ENSMUST00000161618 758 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms