Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm29214-201ENSMUST00000190216 570 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm2505-201ENSMUST00000200413 825 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm44112-201ENSMUST00000204787 372 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Grik1-210ENSMUST00000228034 2708 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Cdc40Q9DC48 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Cdc40Q9DC48 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm11880-201ENSMUST00000117612 399 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm14248-201ENSMUST00000117790 544 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm22702-201ENSMUST00000175372 69 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm44147-201ENSMUST00000204658 94 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm44590-201ENSMUST00000206161 391 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm2089-201ENSMUST00000218294 479 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm2398-201ENSMUST00000218347 883 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm21152-201ENSMUST00000190271 3483 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cdc40Q9DC48 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm15422-201ENSMUST00000117453 541 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm13414-201ENSMUST00000117516 727 ntBASIC6.76□□□□□ -1.33
Cdc40Q9DC48 Gm11945-201ENSMUST00000120551 476 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms