Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm13108-201ENSMUST00000122287 1455 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Retreg1-203ENSMUST00000226438 2783 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm4849-201ENSMUST00000188428 2246 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Tigar-201ENSMUST00000039913 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 AC122397.1-201ENSMUST00000228650 2819 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 CT009530.1-201ENSMUST00000227348 2927 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm25631-201ENSMUST00000104390 130 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm13633-201ENSMUST00000120668 898 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm12288-201ENSMUST00000121054 1282 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm12455-201ENSMUST00000121242 416 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm24854-201ENSMUST00000158025 98 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm27025-201ENSMUST00000182392 942 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm43471-201ENSMUST00000197550 467 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 AC140409.4-201ENSMUST00000215757 538 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm19987-201ENSMUST00000216339 499 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm33778-201ENSMUST00000216884 704 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 AC192616.1-201ENSMUST00000221922 132 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm25926-201ENSMUST00000082899 160 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm44562-201ENSMUST00000207194 1347 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Brinp3-205ENSMUST00000166814 2760 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm7648-201ENSMUST00000173036 1658 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Gm42615-201ENSMUST00000197704 1820 ntBASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Nkx6-1Q99MA9 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Nkx6-1Q99MA9 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms