Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb3Q91XZ7 Gm16291-201ENSMUST00000147378 2594 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Pcdhb3Q91XZ7 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Pcdhb3Q91XZ7 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm45001-201ENSMUST00000208279 2515 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 C330002G04Rik-201ENSMUST00000181623 2054 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Dgat2l6-201ENSMUST00000037541 1640 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 C920021L13Rik-202ENSMUST00000142433 1330 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Hhex-202ENSMUST00000128184 1435 ntTSL 2 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Trav5-4-201ENSMUST00000103664 343 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Oprm1-217ENSMUST00000105615 1258 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm14677-201ENSMUST00000117866 486 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm24597-201ENSMUST00000122503 300 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm23883-201ENSMUST00000122686 290 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Sectm1b-207ENSMUST00000170381 1011 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm17169-201ENSMUST00000171382 351 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Mir6354-201ENSMUST00000184979 116 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm28507-201ENSMUST00000189737 703 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm38390-201ENSMUST00000194859 1065 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm43551-201ENSMUST00000197221 440 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm43396-201ENSMUST00000197506 706 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm42821-201ENSMUST00000199771 489 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 AC153971.2-201ENSMUST00000214553 777 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 AC151843.1-201ENSMUST00000215960 691 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 AC159619.2-201ENSMUST00000222924 401 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 AC091783.3-201ENSMUST00000223969 681 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 AC158521.1-202ENSMUST00000224352 645 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 AC158521.1-201ENSMUST00000225295 660 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 AC144949.1-201ENSMUST00000225358 422 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gsta1-201ENSMUST00000098537 875 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Ankfn1-202ENSMUST00000128717 2391 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm43665-201ENSMUST00000198672 1659 ntBASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Serpinb6a-202ENSMUST00000043552 1547 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Acsbg2-201ENSMUST00000043062 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Aqp9-201ENSMUST00000060917 2643 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Pms2-202ENSMUST00000110709 1386 ntTSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Pcdhb3Q91XZ7 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Eprn-201ENSMUST00000223470 1306 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Gm17259-201ENSMUST00000181520 4608 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Gm24607-201ENSMUST00000104373 133 ntBASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Gm14044-201ENSMUST00000117531 447 ntBASIC8.57□□□□□ -1.04
Pcdhb3Q91XZ7 Gm14470-201ENSMUST00000119085 466 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms