Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rab11fip3Q8CHD8 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rab11fip3Q8CHD8 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm42874-201ENSMUST00000198888 1774 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm15739-201ENSMUST00000118049 872 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm12879-201ENSMUST00000120003 1182 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm5255-201ENSMUST00000120125 642 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm11343-201ENSMUST00000120579 599 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm23139-201ENSMUST00000179454 132 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm7412-201ENSMUST00000191692 605 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Ighv1-30-201ENSMUST00000194082 349 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm42782-201ENSMUST00000197286 522 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm18559-201ENSMUST00000208249 604 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 AC159886.1-201ENSMUST00000217099 1091 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 AC133958.1-201ENSMUST00000227085 961 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Wnk1-218ENSMUST00000161512 1426 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gm43775-201ENSMUST00000201019 3395 ntBASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rab11fip3Q8CHD8 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm5656-201ENSMUST00000171020 1096 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm18191-201ENSMUST00000174624 824 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm17786-201ENSMUST00000182000 427 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm5272-201ENSMUST00000182730 982 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Mir8120-201ENSMUST00000185035 139 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm28983-201ENSMUST00000186685 614 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm28150-201ENSMUST00000187305 614 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm28377-201ENSMUST00000189695 720 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm28070-201ENSMUST00000191502 445 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm36994-201ENSMUST00000192941 492 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm45725-201ENSMUST00000212962 337 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm8275-201ENSMUST00000219732 424 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 AC122397.3-201ENSMUST00000227097 527 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm2065-201ENSMUST00000194697 2757 ntBASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rab11fip3Q8CHD8 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rab11fip3Q8CHD8 Gm45358-201ENSMUST00000209492 2305 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms