Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 AC165260.6-205ENSMUST00000224190 9762 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm38043-201ENSMUST00000195501 5141 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm13207-201ENSMUST00000119862 773 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm13000-201ENSMUST00000120937 496 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm15989-201ENSMUST00000121895 498 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm15079-201ENSMUST00000121943 216 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Mir7029-201ENSMUST00000184777 61 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm28546-201ENSMUST00000188221 615 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm29598-201ENSMUST00000188996 588 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm29739-201ENSMUST00000191760 529 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm38328-201ENSMUST00000195582 317 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm18585-201ENSMUST00000215197 556 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm17875-201ENSMUST00000216005 941 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 AC133176.1-201ENSMUST00000226668 219 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 AC113031.6-202ENSMUST00000228468 1145 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm18697-201ENSMUST00000191179 2126 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm43890-201ENSMUST00000203437 2799 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim47Q8C0E3 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC8.95□□□□□ -0.98
Trim47Q8C0E3 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 AC120163.1-201ENSMUST00000228618 1680 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm14621-201ENSMUST00000117709 689 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm12294-201ENSMUST00000119723 490 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm12124-201ENSMUST00000120504 679 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm14528-201ENSMUST00000120615 231 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm6689-201ENSMUST00000130905 481 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm9498-201ENSMUST00000140849 291 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm26468-201ENSMUST00000158644 106 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm7393-201ENSMUST00000172650 739 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Gm4246-201ENSMUST00000172822 216 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC8.94□□□□□ -0.98
Trim47Q8C0E3 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms