Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tcp10b-201ENSMUST00000086787 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Zfp469-202ENSMUST00000187142 3082 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm13608-201ENSMUST00000121807 1406 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm42979-201ENSMUST00000196287 2228 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Cd300ld-201ENSMUST00000045075 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 2410002F23Rik-202ENSMUST00000071296 4201 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
Trim35Q8C006 A3galt2-201ENSMUST00000030585 3390 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Limk2-202ENSMUST00000101640 3711 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Napb-201ENSMUST00000028926 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Ccser2-209ENSMUST00000183038 1681 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Slc50a1-202ENSMUST00000107460 785 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm13426-201ENSMUST00000117887 795 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm15553-201ENSMUST00000118757 430 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm14838-201ENSMUST00000118913 248 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm14647-201ENSMUST00000119392 680 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm12733-201ENSMUST00000119871 767 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm14559-201ENSMUST00000121745 496 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm16304-201ENSMUST00000129972 775 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm18301-201ENSMUST00000185261 888 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm5979-201ENSMUST00000193850 571 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm37817-201ENSMUST00000195276 434 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Ighv1-70-201ENSMUST00000196509 351 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm5130-201ENSMUST00000210233 959 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm3889-201ENSMUST00000212467 612 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm31849-201ENSMUST00000220306 375 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm8231-201ENSMUST00000221617 783 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm6353-201ENSMUST00000223234 1051 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 AV026068-237ENSMUST00000226075 572 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 AC139350.4-201ENSMUST00000228483 798 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Olfr237-ps1-201ENSMUST00000095953 1000 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm18163-201ENSMUST00000197877 1643 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Fshb-201ENSMUST00000028533 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Abi2-210ENSMUST00000189980 4115 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Ctla4-201ENSMUST00000027164 1933 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Slc14a1-202ENSMUST00000160292 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC9.91□□□□□ -0.82
Trim35Q8C006 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Trim35Q8C006 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim35Q8C006 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Esd-201ENSMUST00000022573 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm43764-201ENSMUST00000202553 3172 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim35Q8C006 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC9.9□□□□□ -0.82
Trim35Q8C006 Gm43481-201ENSMUST00000201715 3672 ntBASIC9.9□□□□□ -0.82
Trim35Q8C006 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms