Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm15789-201ENSMUST00000118992 1359 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm22370-201ENSMUST00000102422 83 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm15181-201ENSMUST00000120142 177 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm15750-201ENSMUST00000120970 616 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm8190-201ENSMUST00000199603 586 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm3678-201ENSMUST00000218888 492 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm19340-201ENSMUST00000221995 345 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 AC129308.1-201ENSMUST00000223800 2309 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 n-R5s72-201ENSMUST00000104518 119 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm11902-201ENSMUST00000118849 270 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm12152-201ENSMUST00000122465 684 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm25574-201ENSMUST00000175245 249 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm22990-201ENSMUST00000175427 89 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm37322-201ENSMUST00000193409 337 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm37637-201ENSMUST00000195540 1256 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm42580-201ENSMUST00000197223 753 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm9800-201ENSMUST00000052615 336 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm22865-201ENSMUST00000083949 214 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm43612-201ENSMUST00000196087 3207 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm19024-201ENSMUST00000194681 1319 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm37109-201ENSMUST00000195475 2254 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Gm11590-201ENSMUST00000118999 1455 ntBASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
Col16a1Q8BLX7 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Mir760-201ENSMUST00000103257 119 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm23450-201ENSMUST00000178285 91 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm27018-201ENSMUST00000181136 225 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Mir6971-201ENSMUST00000183497 63 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm6077-201ENSMUST00000196008 499 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm44565-201ENSMUST00000208194 269 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 AC158750.1-201ENSMUST00000226163 634 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm6436-201ENSMUST00000077163 451 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm22351-201ENSMUST00000083925 107 ntBASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col16a1Q8BLX7 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms